Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
H2afb2S4R1M3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
H2afb2S4R1M3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb2S4R1M3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H2afb2S4R1M3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H2afb2S4R1M3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H2afb2S4R1M3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H2afb2S4R1M3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
H2afb2S4R1M3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.58■□□□□ 0.25
H2afb2S4R1M3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H2afb2S4R1M3 Gm15565-201ENSMUST00000118890 427 ntBASIC16.58■□□□□ 0.24
H2afb2S4R1M3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
H2afb2S4R1M3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.58■□□□□ 0.24
H2afb2S4R1M3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
H2afb2S4R1M3 Mir5130-201ENSMUST00000175160 84 ntBASIC16.58■□□□□ 0.24
H2afb2S4R1M3 Gm7889-201ENSMUST00000185591 958 ntBASIC16.58■□□□□ 0.24
H2afb2S4R1M3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb2S4R1M3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.58■□□□□ 0.24
H2afb2S4R1M3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb2S4R1M3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.58■□□□□ 0.24
H2afb2S4R1M3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb2S4R1M3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb2S4R1M3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
H2afb2S4R1M3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
H2afb2S4R1M3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
H2afb2S4R1M3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb2S4R1M3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb2S4R1M3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Gm18959-201ENSMUST00000208954 655 ntBASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb2S4R1M3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Gm45058-201ENSMUST00000205810 766 ntBASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Gm10566-201ENSMUST00000086739 996 ntBASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb2S4R1M3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Mir1668-201ENSMUST00000184114 107 ntBASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms