Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.14■□□□□ 0.33
Clcn5Q9WVD4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn5Q9WVD4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Clcn5Q9WVD4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.14■□□□□ 0.33
Clcn5Q9WVD4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn5Q9WVD4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Clcn5Q9WVD4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.14■□□□□ 0.33
Clcn5Q9WVD4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn5Q9WVD4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn5Q9WVD4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn5Q9WVD4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Clcn5Q9WVD4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn5Q9WVD4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn5Q9WVD4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn5Q9WVD4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn5Q9WVD4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn5Q9WVD4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn5Q9WVD4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn5Q9WVD4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Clcn5Q9WVD4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn5Q9WVD4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Clcn5Q9WVD4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn5Q9WVD4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.13■□□□□ 0.33
Clcn5Q9WVD4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.13■□□□□ 0.33
Clcn5Q9WVD4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Clcn5Q9WVD4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn5Q9WVD4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Clcn5Q9WVD4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Clcn5Q9WVD4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn5Q9WVD4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn5Q9WVD4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Gm1401-201ENSMUST00000122048 772 ntBASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Rps4l-201ENSMUST00000071745 943 ntBASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.12■□□□□ 0.33
Clcn5Q9WVD4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn5Q9WVD4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn5Q9WVD4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn5Q9WVD4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Clcn5Q9WVD4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn5Q9WVD4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn5Q9WVD4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.11■□□□□ 0.33
Clcn5Q9WVD4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn5Q9WVD4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn5Q9WVD4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn5Q9WVD4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn5Q9WVD4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn5Q9WVD4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn5Q9WVD4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Clcn5Q9WVD4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn5Q9WVD4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.1■□□□□ 0.33
Clcn5Q9WVD4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn5Q9WVD4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn5Q9WVD4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn5Q9WVD4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn5Q9WVD4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn5Q9WVD4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn5Q9WVD4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.1■□□□□ 0.33
Clcn5Q9WVD4 Gm2213-201ENSMUST00000197485 688 ntBASIC17.1■□□□□ 0.33
Clcn5Q9WVD4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn5Q9WVD4 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.1■□□□□ 0.33
Clcn5Q9WVD4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Clcn5Q9WVD4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn5Q9WVD4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn5Q9WVD4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn5Q9WVD4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn5Q9WVD4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn5Q9WVD4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn5Q9WVD4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn5Q9WVD4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn5Q9WVD4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn5Q9WVD4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.09■□□□□ 0.33
Clcn5Q9WVD4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.09■□□□□ 0.33
Clcn5Q9WVD4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Clcn5Q9WVD4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn5Q9WVD4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn5Q9WVD4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn5Q9WVD4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms