Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Gm12644-201ENSMUST00000119935 606 ntBASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Gm44357-201ENSMUST00000195897 142 ntBASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Gm19658-201ENSMUST00000196231 138 ntBASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Gm44367-201ENSMUST00000196836 138 ntBASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Gm44350-201ENSMUST00000197197 138 ntBASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Gm44390-201ENSMUST00000197533 144 ntBASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Gm44313-201ENSMUST00000198018 138 ntBASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Gm44486-201ENSMUST00000198508 138 ntBASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Gm44454-201ENSMUST00000198541 138 ntBASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Gm44314-201ENSMUST00000199263 138 ntBASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Gm44394-201ENSMUST00000199558 138 ntBASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Gm44484-201ENSMUST00000199873 138 ntBASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Gm44466-201ENSMUST00000200264 138 ntBASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Gm44359-201ENSMUST00000200671 138 ntBASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Scn8aQ9WTU3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Gm24589-201ENSMUST00000116692 94 ntBASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Gm12895-201ENSMUST00000122214 226 ntBASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn8aQ9WTU3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn8aQ9WTU3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn8aQ9WTU3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.6■□□□□ 0.25
Scn8aQ9WTU3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Scn8aQ9WTU3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.6■□□□□ 0.25
Scn8aQ9WTU3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Scn8aQ9WTU3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.6■□□□□ 0.25
Scn8aQ9WTU3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn8aQ9WTU3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Scn8aQ9WTU3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn8aQ9WTU3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn8aQ9WTU3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn8aQ9WTU3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn8aQ9WTU3 Gm15165-201ENSMUST00000118140 502 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms