Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp6ap1Q9R1Q9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp6ap1Q9R1Q9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp6ap1Q9R1Q9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp6ap1Q9R1Q9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp6ap1Q9R1Q9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp6ap1Q9R1Q9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp6ap1Q9R1Q9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atp6ap1Q9R1Q9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp6ap1Q9R1Q9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp6ap1Q9R1Q9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp6ap1Q9R1Q9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atp6ap1Q9R1Q9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp6ap1Q9R1Q9 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.24■□□□□ 0.19
Atp6ap1Q9R1Q9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atp6ap1Q9R1Q9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atp6ap1Q9R1Q9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp6ap1Q9R1Q9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp6ap1Q9R1Q9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp6ap1Q9R1Q9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atp6ap1Q9R1Q9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Gm13216-201ENSMUST00000117145 591 ntBASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Gm21559-201ENSMUST00000220638 855 ntBASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Gm18032-201ENSMUST00000222541 538 ntBASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Gm8587-201ENSMUST00000076538 843 ntBASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp6ap1Q9R1Q9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atp6ap1Q9R1Q9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atp6ap1Q9R1Q9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.22■□□□□ 0.19
Atp6ap1Q9R1Q9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp6ap1Q9R1Q9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp6ap1Q9R1Q9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp6ap1Q9R1Q9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.22■□□□□ 0.19
Atp6ap1Q9R1Q9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp6ap1Q9R1Q9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atp6ap1Q9R1Q9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp6ap1Q9R1Q9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Atp6ap1Q9R1Q9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp6ap1Q9R1Q9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp6ap1Q9R1Q9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Atp6ap1Q9R1Q9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Atp6ap1Q9R1Q9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Atp6ap1Q9R1Q9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp6ap1Q9R1Q9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Atp6ap1Q9R1Q9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Gm10013-201ENSMUST00000106074 672 ntBASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Gm11336-201ENSMUST00000118168 334 ntBASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Gm13836-201ENSMUST00000121159 501 ntBASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms