Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Nr2e3Q9QXZ7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nr2e3Q9QXZ7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr2e3Q9QXZ7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Nr2e3Q9QXZ7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr2e3Q9QXZ7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr2e3Q9QXZ7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Nr2e3Q9QXZ7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Nr2e3Q9QXZ7 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.75■□□□□ 0.59
Nr2e3Q9QXZ7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr2e3Q9QXZ7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr2e3Q9QXZ7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nr2e3Q9QXZ7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr2e3Q9QXZ7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Gm6623-201ENSMUST00000173570 544 ntBASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Gm29518-201ENSMUST00000190858 372 ntBASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Nr2e3Q9QXZ7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nr2e3Q9QXZ7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.73■□□□□ 0.59
Nr2e3Q9QXZ7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nr2e3Q9QXZ7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nr2e3Q9QXZ7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nr2e3Q9QXZ7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Nr2e3Q9QXZ7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Nr2e3Q9QXZ7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nr2e3Q9QXZ7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nr2e3Q9QXZ7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Nr2e3Q9QXZ7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nr2e3Q9QXZ7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Nr2e3Q9QXZ7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.73■□□□□ 0.59
Nr2e3Q9QXZ7 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nr2e3Q9QXZ7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nr2e3Q9QXZ7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nr2e3Q9QXZ7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nr2e3Q9QXZ7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nr2e3Q9QXZ7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.72■□□□□ 0.59
Nr2e3Q9QXZ7 Gm17808-201ENSMUST00000200859 894 ntBASIC18.72■□□□□ 0.59
Nr2e3Q9QXZ7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nr2e3Q9QXZ7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nr2e3Q9QXZ7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Nr2e3Q9QXZ7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nr2e3Q9QXZ7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.72■□□□□ 0.59
Nr2e3Q9QXZ7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Nr2e3Q9QXZ7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nr2e3Q9QXZ7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Nr2e3Q9QXZ7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nr2e3Q9QXZ7 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.72■□□□□ 0.59
Nr2e3Q9QXZ7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nr2e3Q9QXZ7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nr2e3Q9QXZ7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Nr2e3Q9QXZ7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nr2e3Q9QXZ7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.71■□□□□ 0.59
Nr2e3Q9QXZ7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nr2e3Q9QXZ7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nr2e3Q9QXZ7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nr2e3Q9QXZ7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nr2e3Q9QXZ7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nr2e3Q9QXZ7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nr2e3Q9QXZ7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nr2e3Q9QXZ7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms