Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Shroom3Q9QXN0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Shroom3Q9QXN0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom3Q9QXN0 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.61■□□□□ 0.25
Shroom3Q9QXN0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom3Q9QXN0 Gm11355-201ENSMUST00000121120 306 ntBASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom3Q9QXN0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 Gm27357-201ENSMUST00000183754 135 ntBASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom3Q9QXN0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Shroom3Q9QXN0 Mir770-201ENSMUST00000103252 94 ntBASIC16.58■□□□□ 0.25
Shroom3Q9QXN0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.58■□□□□ 0.25
Shroom3Q9QXN0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Shroom3Q9QXN0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Shroom3Q9QXN0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
Shroom3Q9QXN0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Shroom3Q9QXN0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Shroom3Q9QXN0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
Shroom3Q9QXN0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Shroom3Q9QXN0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Shroom3Q9QXN0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Shroom3Q9QXN0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Shroom3Q9QXN0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.58■□□□□ 0.24
Shroom3Q9QXN0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Shroom3Q9QXN0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Shroom3Q9QXN0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shroom3Q9QXN0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shroom3Q9QXN0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shroom3Q9QXN0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shroom3Q9QXN0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Shroom3Q9QXN0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom3Q9QXN0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.57■□□□□ 0.24
Shroom3Q9QXN0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom3Q9QXN0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom3Q9QXN0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom3Q9QXN0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom3Q9QXN0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.57■□□□□ 0.24
Shroom3Q9QXN0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom3Q9QXN0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom3Q9QXN0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom3Q9QXN0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom3Q9QXN0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom3Q9QXN0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.57■□□□□ 0.24
Shroom3Q9QXN0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom3Q9QXN0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom3Q9QXN0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom3Q9QXN0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom3Q9QXN0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom3Q9QXN0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom3Q9QXN0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms