Protein–RNA interactions for Protein: Q9JJZ9

Cngb3, Cyclic nucleotide-gated cation channel beta-3, mousemouse

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cngb3Q9JJZ9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Gm11539-201ENSMUST00000119837 557 ntBASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
Cngb3Q9JJZ9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cngb3Q9JJZ9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cngb3Q9JJZ9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cngb3Q9JJZ9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cngb3Q9JJZ9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cngb3Q9JJZ9 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.39■□□□□ 0.21
Cngb3Q9JJZ9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cngb3Q9JJZ9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cngb3Q9JJZ9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cngb3Q9JJZ9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.39■□□□□ 0.21
Cngb3Q9JJZ9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cngb3Q9JJZ9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.39■□□□□ 0.21
Cngb3Q9JJZ9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cngb3Q9JJZ9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cngb3Q9JJZ9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.39■□□□□ 0.21
Cngb3Q9JJZ9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cngb3Q9JJZ9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cngb3Q9JJZ9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Gm16061-201ENSMUST00000122167 857 ntBASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Actl10-202ENSMUST00000226583 1501 ntBASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cngb3Q9JJZ9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Gm13436-201ENSMUST00000120418 567 ntBASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Gm18115-201ENSMUST00000221209 621 ntBASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cngb3Q9JJZ9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms