Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1fQ9JIS7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.8■□□□□ 0.6
Cacna1fQ9JIS7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.8■□□□□ 0.6
Cacna1fQ9JIS7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1fQ9JIS7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Cacna1fQ9JIS7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1fQ9JIS7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1fQ9JIS7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1fQ9JIS7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cacna1fQ9JIS7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1fQ9JIS7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1fQ9JIS7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1fQ9JIS7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cacna1fQ9JIS7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1fQ9JIS7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cacna1fQ9JIS7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1fQ9JIS7 Gm14494-201ENSMUST00000118786 435 ntBASIC18.79■□□□□ 0.6
Cacna1fQ9JIS7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.79■□□□□ 0.6
Cacna1fQ9JIS7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1fQ9JIS7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1fQ9JIS7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1fQ9JIS7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1fQ9JIS7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1fQ9JIS7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1fQ9JIS7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1fQ9JIS7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cacna1fQ9JIS7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1fQ9JIS7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.79■□□□□ 0.6
Cacna1fQ9JIS7 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1fQ9JIS7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1fQ9JIS7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Gm15467-201ENSMUST00000120582 445 ntBASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Rarb-207ENSMUST00000225921 2756 ntBASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.78■□□□□ 0.6
Cacna1fQ9JIS7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1fQ9JIS7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.77■□□□□ 0.6
Cacna1fQ9JIS7 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.77■□□□□ 0.6
Cacna1fQ9JIS7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1fQ9JIS7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1fQ9JIS7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1fQ9JIS7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1fQ9JIS7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1fQ9JIS7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1fQ9JIS7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1fQ9JIS7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.77■□□□□ 0.59
Cacna1fQ9JIS7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.77■□□□□ 0.59
Cacna1fQ9JIS7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cacna1fQ9JIS7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cacna1fQ9JIS7 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.77■□□□□ 0.59
Cacna1fQ9JIS7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cacna1fQ9JIS7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cacna1fQ9JIS7 Gm15590-201ENSMUST00000078419 552 ntBASIC18.77■□□□□ 0.59
Cacna1fQ9JIS7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Cacna1fQ9JIS7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.76■□□□□ 0.59
Cacna1fQ9JIS7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1fQ9JIS7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1fQ9JIS7 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.76■□□□□ 0.59
Cacna1fQ9JIS7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1fQ9JIS7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Cacna1fQ9JIS7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.76■□□□□ 0.59
Cacna1fQ9JIS7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1fQ9JIS7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1fQ9JIS7 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1fQ9JIS7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1fQ9JIS7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1fQ9JIS7 Gm27646-201ENSMUST00000183989 110 ntBASIC18.75■□□□□ 0.59
Cacna1fQ9JIS7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1fQ9JIS7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cacna1fQ9JIS7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cacna1fQ9JIS7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1fQ9JIS7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.75■□□□□ 0.59
Cacna1fQ9JIS7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.75■□□□□ 0.59
Cacna1fQ9JIS7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1fQ9JIS7 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1fQ9JIS7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1fQ9JIS7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.75■□□□□ 0.59
Cacna1fQ9JIS7 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.75■□□□□ 0.59
Cacna1fQ9JIS7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1fQ9JIS7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Cacna1fQ9JIS7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1fQ9JIS7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1fQ9JIS7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms