Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube3bQ9ES34 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube3bQ9ES34 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube3bQ9ES34 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3bQ9ES34 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3bQ9ES34 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ube3bQ9ES34 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3bQ9ES34 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3bQ9ES34 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ube3bQ9ES34 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3bQ9ES34 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.68■□□□□ 0.74
Ube3bQ9ES34 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3bQ9ES34 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.68■□□□□ 0.74
Ube3bQ9ES34 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3bQ9ES34 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.68■□□□□ 0.74
Ube3bQ9ES34 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.68■□□□□ 0.74
Ube3bQ9ES34 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3bQ9ES34 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3bQ9ES34 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3bQ9ES34 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.67■□□□□ 0.74
Ube3bQ9ES34 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Ube3bQ9ES34 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ube3bQ9ES34 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.67■□□□□ 0.74
Ube3bQ9ES34 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3bQ9ES34 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3bQ9ES34 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3bQ9ES34 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3bQ9ES34 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3bQ9ES34 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3bQ9ES34 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
Ube3bQ9ES34 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3bQ9ES34 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3bQ9ES34 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Ube3bQ9ES34 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.67■□□□□ 0.74
Ube3bQ9ES34 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ube3bQ9ES34 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.66■□□□□ 0.74
Ube3bQ9ES34 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3bQ9ES34 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3bQ9ES34 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3bQ9ES34 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3bQ9ES34 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3bQ9ES34 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3bQ9ES34 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Ube3bQ9ES34 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3bQ9ES34 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ube3bQ9ES34 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.66■□□□□ 0.74
Ube3bQ9ES34 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3bQ9ES34 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3bQ9ES34 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3bQ9ES34 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3bQ9ES34 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3bQ9ES34 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.66■□□□□ 0.74
Ube3bQ9ES34 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3bQ9ES34 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube3bQ9ES34 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube3bQ9ES34 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube3bQ9ES34 Gm15372-201ENSMUST00000120729 834 ntBASIC19.65■□□□□ 0.74
Ube3bQ9ES34 Gm12895-201ENSMUST00000122214 226 ntBASIC19.65■□□□□ 0.74
Ube3bQ9ES34 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube3bQ9ES34 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ube3bQ9ES34 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.65■□□□□ 0.74
Ube3bQ9ES34 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.65■□□□□ 0.74
Ube3bQ9ES34 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube3bQ9ES34 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ube3bQ9ES34 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube3bQ9ES34 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube3bQ9ES34 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ube3bQ9ES34 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.65■□□□□ 0.74
Ube3bQ9ES34 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube3bQ9ES34 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube3bQ9ES34 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube3bQ9ES34 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ube3bQ9ES34 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ube3bQ9ES34 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ube3bQ9ES34 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.64■□□□□ 0.73
Ube3bQ9ES34 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ube3bQ9ES34 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ube3bQ9ES34 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ube3bQ9ES34 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Ube3bQ9ES34 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ube3bQ9ES34 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ube3bQ9ES34 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ube3bQ9ES34 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Ube3bQ9ES34 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube3bQ9ES34 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube3bQ9ES34 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ube3bQ9ES34 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube3bQ9ES34 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube3bQ9ES34 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube3bQ9ES34 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube3bQ9ES34 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube3bQ9ES34 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ube3bQ9ES34 Gm13216-201ENSMUST00000117145 591 ntBASIC19.63■□□□□ 0.73
Ube3bQ9ES34 Rprl3-201ENSMUST00000157400 290 ntBASIC19.63■□□□□ 0.73
Ube3bQ9ES34 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ube3bQ9ES34 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube3bQ9ES34 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube3bQ9ES34 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube3bQ9ES34 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ube3bQ9ES34 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms