Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps35Q9EQH3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Gm27389-201ENSMUST00000183622 195 ntBASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Vps35Q9EQH3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps35Q9EQH3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps35Q9EQH3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps35Q9EQH3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps35Q9EQH3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Vps35Q9EQH3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps35Q9EQH3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps35Q9EQH3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps35Q9EQH3 Gm13216-201ENSMUST00000117145 591 ntBASIC16.58■□□□□ 0.24
Vps35Q9EQH3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps35Q9EQH3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.58■□□□□ 0.24
Vps35Q9EQH3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps35Q9EQH3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Vps35Q9EQH3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps35Q9EQH3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps35Q9EQH3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps35Q9EQH3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps35Q9EQH3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Vps35Q9EQH3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps35Q9EQH3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Gm21559-201ENSMUST00000220638 855 ntBASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Gm8587-201ENSMUST00000076538 843 ntBASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Gm10566-201ENSMUST00000086739 996 ntBASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps35Q9EQH3 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.56■□□□□ 0.24
Vps35Q9EQH3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps35Q9EQH3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps35Q9EQH3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Vps35Q9EQH3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps35Q9EQH3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps35Q9EQH3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vps35Q9EQH3 Gm26039-201ENSMUST00000158152 144 ntBASIC16.56■□□□□ 0.24
Vps35Q9EQH3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps35Q9EQH3 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.56■□□□□ 0.24
Vps35Q9EQH3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps35Q9EQH3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps35Q9EQH3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps35Q9EQH3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps35Q9EQH3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps35Q9EQH3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps35Q9EQH3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Vps35Q9EQH3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps35Q9EQH3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps35Q9EQH3 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.56■□□□□ 0.24
Vps35Q9EQH3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps35Q9EQH3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms