Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne8Q9DC53 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne8Q9DC53 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne8Q9DC53 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne8Q9DC53 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne8Q9DC53 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cpne8Q9DC53 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne8Q9DC53 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne8Q9DC53 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne8Q9DC53 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne8Q9DC53 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cpne8Q9DC53 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Cpne8Q9DC53 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne8Q9DC53 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cpne8Q9DC53 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne8Q9DC53 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne8Q9DC53 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cpne8Q9DC53 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne8Q9DC53 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne8Q9DC53 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne8Q9DC53 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne8Q9DC53 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne8Q9DC53 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne8Q9DC53 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.3■□□□□ 0.36
Cpne8Q9DC53 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne8Q9DC53 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne8Q9DC53 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne8Q9DC53 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne8Q9DC53 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Actl10-202ENSMUST00000226583 1501 ntBASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Gm13559-201ENSMUST00000120476 863 ntBASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne8Q9DC53 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpne8Q9DC53 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cpne8Q9DC53 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpne8Q9DC53 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cpne8Q9DC53 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpne8Q9DC53 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.27■□□□□ 0.36
Cpne8Q9DC53 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms