Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp5Q9D7S9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp5Q9D7S9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp5Q9D7S9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp5Q9D7S9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp5Q9D7S9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp5Q9D7S9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.77■□□□□ 0.92
Chmp5Q9D7S9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp5Q9D7S9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp5Q9D7S9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.77■□□□□ 0.92
Chmp5Q9D7S9 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.77■□□□□ 0.92
Chmp5Q9D7S9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.77■□□□□ 0.92
Chmp5Q9D7S9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp5Q9D7S9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chmp5Q9D7S9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chmp5Q9D7S9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Chmp5Q9D7S9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp5Q9D7S9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp5Q9D7S9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp5Q9D7S9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC20.76■□□□□ 0.91
Chmp5Q9D7S9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp5Q9D7S9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp5Q9D7S9 Gm9731-201ENSMUST00000209480 747 ntBASIC20.76■□□□□ 0.91
Chmp5Q9D7S9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp5Q9D7S9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp5Q9D7S9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp5Q9D7S9 Gm43072-201ENSMUST00000200283 1671 ntBASIC20.76■□□□□ 0.91
Chmp5Q9D7S9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp5Q9D7S9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp5Q9D7S9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp5Q9D7S9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp5Q9D7S9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp5Q9D7S9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Chmp5Q9D7S9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp5Q9D7S9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp5Q9D7S9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp5Q9D7S9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Gm12441-201ENSMUST00000121806 588 ntBASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Gm37856-201ENSMUST00000191634 999 ntBASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms