Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a3Q9D554 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a3Q9D554 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a3Q9D554 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.92■□□□□ 0.3
Sf3a3Q9D554 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a3Q9D554 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a3Q9D554 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a3Q9D554 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a3Q9D554 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a3Q9D554 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a3Q9D554 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a3Q9D554 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a3Q9D554 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a3Q9D554 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.92■□□□□ 0.3
Sf3a3Q9D554 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a3Q9D554 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a3Q9D554 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a3Q9D554 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.91■□□□□ 0.3
Sf3a3Q9D554 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.91■□□□□ 0.3
Sf3a3Q9D554 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a3Q9D554 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Sf3a3Q9D554 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a3Q9D554 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a3Q9D554 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.91■□□□□ 0.3
Sf3a3Q9D554 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.91■□□□□ 0.3
Sf3a3Q9D554 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a3Q9D554 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a3Q9D554 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a3Q9D554 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.91■□□□□ 0.3
Sf3a3Q9D554 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a3Q9D554 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Sf3a3Q9D554 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Sf3a3Q9D554 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a3Q9D554 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a3Q9D554 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.91■□□□□ 0.3
Sf3a3Q9D554 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a3Q9D554 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sf3a3Q9D554 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.9■□□□□ 0.3
Sf3a3Q9D554 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a3Q9D554 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a3Q9D554 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sf3a3Q9D554 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a3Q9D554 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a3Q9D554 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sf3a3Q9D554 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a3Q9D554 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Sf3a3Q9D554 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a3Q9D554 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a3Q9D554 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a3Q9D554 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.9■□□□□ 0.3
Sf3a3Q9D554 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sf3a3Q9D554 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a3Q9D554 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a3Q9D554 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a3Q9D554 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a3Q9D554 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sf3a3Q9D554 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sf3a3Q9D554 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sf3a3Q9D554 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Gm38285-201ENSMUST00000192928 922 ntBASIC16.89■□□□□ 0.29
Sf3a3Q9D554 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Sf3a3Q9D554 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a3Q9D554 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a3Q9D554 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a3Q9D554 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.88■□□□□ 0.29
Sf3a3Q9D554 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a3Q9D554 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a3Q9D554 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a3Q9D554 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a3Q9D554 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a3Q9D554 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Sf3a3Q9D554 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Sf3a3Q9D554 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a3Q9D554 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a3Q9D554 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a3Q9D554 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.88■□□□□ 0.29
Sf3a3Q9D554 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a3Q9D554 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Sf3a3Q9D554 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.87■□□□□ 0.29
Sf3a3Q9D554 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms