Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc7Q9D541 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc7Q9D541 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc7Q9D541 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc7Q9D541 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc7Q9D541 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc7Q9D541 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc7Q9D541 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.4■□□□□ 0.7
Ccdc7Q9D541 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc7Q9D541 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc7Q9D541 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc7Q9D541 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc7Q9D541 Gm10812-201ENSMUST00000099864 546 ntBASIC19.4■□□□□ 0.7
Ccdc7Q9D541 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc7Q9D541 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc7Q9D541 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc7Q9D541 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc7Q9D541 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc7Q9D541 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc7Q9D541 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc7Q9D541 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc7Q9D541 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc7Q9D541 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc7Q9D541 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc7Q9D541 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc7Q9D541 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc7Q9D541 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.39■□□□□ 0.69
Ccdc7Q9D541 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc7Q9D541 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Ccdc7Q9D541 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.39■□□□□ 0.69
Ccdc7Q9D541 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc7Q9D541 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc7Q9D541 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc7Q9D541 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc7Q9D541 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc7Q9D541 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc7Q9D541 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.39■□□□□ 0.69
Ccdc7Q9D541 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Ccdc7Q9D541 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc7Q9D541 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc7Q9D541 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc7Q9D541 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc7Q9D541 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc7Q9D541 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc7Q9D541 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ccdc7Q9D541 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc7Q9D541 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc7Q9D541 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc7Q9D541 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc7Q9D541 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ccdc7Q9D541 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc7Q9D541 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.38■□□□□ 0.69
Ccdc7Q9D541 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.38■□□□□ 0.69
Ccdc7Q9D541 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc7Q9D541 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc7Q9D541 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc7Q9D541 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc7Q9D541 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc7Q9D541 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc7Q9D541 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc7Q9D541 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc7Q9D541 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ccdc7Q9D541 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc7Q9D541 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc7Q9D541 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc7Q9D541 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc7Q9D541 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc7Q9D541 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc7Q9D541 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc7Q9D541 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc7Q9D541 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc7Q9D541 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc7Q9D541 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc7Q9D541 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc7Q9D541 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc7Q9D541 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc7Q9D541 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc7Q9D541 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc7Q9D541 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc7Q9D541 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc7Q9D541 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc7Q9D541 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc7Q9D541 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc7Q9D541 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc7Q9D541 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc7Q9D541 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc7Q9D541 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc7Q9D541 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc7Q9D541 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc7Q9D541 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms