Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3404Q9D506 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3404Q9D506 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3404Q9D506 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Gm3404Q9D506 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Gm3404Q9D506 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Gm3404Q9D506 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3404Q9D506 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.63■□□□□ 0.41
Gm3404Q9D506 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3404Q9D506 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.63■□□□□ 0.41
Gm3404Q9D506 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3404Q9D506 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3404Q9D506 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3404Q9D506 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3404Q9D506 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3404Q9D506 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3404Q9D506 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3404Q9D506 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.62■□□□□ 0.41
Gm3404Q9D506 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3404Q9D506 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.62■□□□□ 0.41
Gm3404Q9D506 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3404Q9D506 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3404Q9D506 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3404Q9D506 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3404Q9D506 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3404Q9D506 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3404Q9D506 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3404Q9D506 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3404Q9D506 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3404Q9D506 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.61■□□□□ 0.41
Gm3404Q9D506 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3404Q9D506 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3404Q9D506 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3404Q9D506 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3404Q9D506 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3404Q9D506 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3404Q9D506 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3404Q9D506 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3404Q9D506 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3404Q9D506 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Gm3404Q9D506 Gm6659-201ENSMUST00000174752 547 ntBASIC17.61■□□□□ 0.41
Gm3404Q9D506 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Gm3404Q9D506 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Gm3404Q9D506 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3404Q9D506 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3404Q9D506 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Gm3404Q9D506 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gm3404Q9D506 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.61■□□□□ 0.41
Gm3404Q9D506 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3404Q9D506 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Gm3404Q9D506 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3404Q9D506 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3404Q9D506 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3404Q9D506 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Gm3404Q9D506 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3404Q9D506 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.6■□□□□ 0.41
Gm3404Q9D506 Gm23634-201ENSMUST00000175071 91 ntBASIC17.6■□□□□ 0.41
Gm3404Q9D506 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.6■□□□□ 0.41
Gm3404Q9D506 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3404Q9D506 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Gm3404Q9D506 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3404Q9D506 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3404Q9D506 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Gm3404Q9D506 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Gm3404Q9D506 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3404Q9D506 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3404Q9D506 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3404Q9D506 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3404Q9D506 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3404Q9D506 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Gm3404Q9D506 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3404Q9D506 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3404Q9D506 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3404Q9D506 Gm11336-201ENSMUST00000118168 334 ntBASIC17.59■□□□□ 0.41
Gm3404Q9D506 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3404Q9D506 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3404Q9D506 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3404Q9D506 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3404Q9D506 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3404Q9D506 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3404Q9D506 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Gm3404Q9D506 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Gm3404Q9D506 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm3404Q9D506 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm3404Q9D506 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms