Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stag1Q9D3E6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.71■□□□□ 0.75
Stag1Q9D3E6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stag1Q9D3E6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stag1Q9D3E6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.71■□□□□ 0.75
Stag1Q9D3E6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stag1Q9D3E6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Stag1Q9D3E6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stag1Q9D3E6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Stag1Q9D3E6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Stag1Q9D3E6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Stag1Q9D3E6 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.71■□□□□ 0.75
Stag1Q9D3E6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Stag1Q9D3E6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stag1Q9D3E6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stag1Q9D3E6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.71■□□□□ 0.75
Stag1Q9D3E6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stag1Q9D3E6 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.7■□□□□ 0.74
Stag1Q9D3E6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stag1Q9D3E6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stag1Q9D3E6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stag1Q9D3E6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stag1Q9D3E6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stag1Q9D3E6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Stag1Q9D3E6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stag1Q9D3E6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stag1Q9D3E6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Stag1Q9D3E6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Stag1Q9D3E6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.7■□□□□ 0.74
Stag1Q9D3E6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Stag1Q9D3E6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.7■□□□□ 0.74
Stag1Q9D3E6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stag1Q9D3E6 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.7■□□□□ 0.74
Stag1Q9D3E6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stag1Q9D3E6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Stag1Q9D3E6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stag1Q9D3E6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Stag1Q9D3E6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stag1Q9D3E6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Stag1Q9D3E6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.69■□□□□ 0.74
Stag1Q9D3E6 Gm44454-201ENSMUST00000198541 138 ntBASIC19.69■□□□□ 0.74
Stag1Q9D3E6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Stag1Q9D3E6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stag1Q9D3E6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stag1Q9D3E6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stag1Q9D3E6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stag1Q9D3E6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stag1Q9D3E6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Stag1Q9D3E6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stag1Q9D3E6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stag1Q9D3E6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Stag1Q9D3E6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Stag1Q9D3E6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Stag1Q9D3E6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Stag1Q9D3E6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Stag1Q9D3E6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.67■□□□□ 0.74
Stag1Q9D3E6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Stag1Q9D3E6 Gm27867-201ENSMUST00000184778 125 ntBASIC19.67■□□□□ 0.74
Stag1Q9D3E6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Stag1Q9D3E6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Stag1Q9D3E6 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.67■□□□□ 0.74
Stag1Q9D3E6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Stag1Q9D3E6 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.67■□□□□ 0.74
Stag1Q9D3E6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.67■□□□□ 0.74
Stag1Q9D3E6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Stag1Q9D3E6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Stag1Q9D3E6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Stag1Q9D3E6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Stag1Q9D3E6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Stag1Q9D3E6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Stag1Q9D3E6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Stag1Q9D3E6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Stag1Q9D3E6 Gm15165-201ENSMUST00000118140 502 ntBASIC19.66■□□□□ 0.74
Stag1Q9D3E6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.66■□□□□ 0.74
Stag1Q9D3E6 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.66■□□□□ 0.74
Stag1Q9D3E6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms