Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim42Q9D2H5 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim42Q9D2H5 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
Trim42Q9D2H5 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim42Q9D2H5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim42Q9D2H5 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trim42Q9D2H5 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Gm10138-203ENSMUST00000206952 366 ntBASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim42Q9D2H5 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 AV356131-201ENSMUST00000206201 750 ntBASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim42Q9D2H5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim42Q9D2H5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim42Q9D2H5 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.58■□□□□ 0.25
Trim42Q9D2H5 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim42Q9D2H5 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim42Q9D2H5 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim42Q9D2H5 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Gm5408-201ENSMUST00000197998 747 ntBASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms