Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Gm5408-201ENSMUST00000197998 747 ntBASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Gm2559-201ENSMUST00000201323 363 ntBASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1bQ9D0N7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1bQ9D0N7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.65■□□□□ 0.1
Chaf1bQ9D0N7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1bQ9D0N7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1bQ9D0N7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chaf1bQ9D0N7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1bQ9D0N7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.65■□□□□ 0.1
Chaf1bQ9D0N7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.65■□□□□ 0.1
Chaf1bQ9D0N7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1bQ9D0N7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chaf1bQ9D0N7 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1bQ9D0N7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.65■□□□□ 0.1
Chaf1bQ9D0N7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1bQ9D0N7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1bQ9D0N7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1bQ9D0N7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1bQ9D0N7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1bQ9D0N7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Chaf1bQ9D0N7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1bQ9D0N7 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.64■□□□□ 0.09
Chaf1bQ9D0N7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1bQ9D0N7 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1bQ9D0N7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1bQ9D0N7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1bQ9D0N7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1bQ9D0N7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1bQ9D0N7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1bQ9D0N7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1bQ9D0N7 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1bQ9D0N7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1bQ9D0N7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Chaf1bQ9D0N7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1bQ9D0N7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1bQ9D0N7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Chaf1bQ9D0N7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1bQ9D0N7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chaf1bQ9D0N7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chaf1bQ9D0N7 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chaf1bQ9D0N7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chaf1bQ9D0N7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chaf1bQ9D0N7 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.62■□□□□ 0.09
Chaf1bQ9D0N7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Chaf1bQ9D0N7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chaf1bQ9D0N7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chaf1bQ9D0N7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Chaf1bQ9D0N7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chaf1bQ9D0N7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chaf1bQ9D0N7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chaf1bQ9D0N7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms