Protein–RNA interactions for Protein: Q9CYZ8

Ssbp2, Single-stranded DNA-binding protein 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp2Q9CYZ8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssbp2Q9CYZ8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssbp2Q9CYZ8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssbp2Q9CYZ8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssbp2Q9CYZ8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssbp2Q9CYZ8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssbp2Q9CYZ8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssbp2Q9CYZ8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssbp2Q9CYZ8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssbp2Q9CYZ8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssbp2Q9CYZ8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssbp2Q9CYZ8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssbp2Q9CYZ8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ssbp2Q9CYZ8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Ssbp2Q9CYZ8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ssbp2Q9CYZ8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ssbp2Q9CYZ8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ssbp2Q9CYZ8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Ssbp2Q9CYZ8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ssbp2Q9CYZ8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ssbp2Q9CYZ8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Gm27463-201ENSMUST00000183569 57 ntBASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.33□□□□□ -0.28
Ssbp2Q9CYZ8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Gm11539-201ENSMUST00000119837 557 ntBASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Gm13436-201ENSMUST00000120418 567 ntBASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Gm30025-201ENSMUST00000218555 728 ntBASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssbp2Q9CYZ8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Gm7370-201ENSMUST00000219471 767 ntBASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssbp2Q9CYZ8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms