Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdhd3Q9CYW4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdhd3Q9CYW4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdhd3Q9CYW4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Hdhd3Q9CYW4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdhd3Q9CYW4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdhd3Q9CYW4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdhd3Q9CYW4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hdhd3Q9CYW4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Hdhd3Q9CYW4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hdhd3Q9CYW4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdhd3Q9CYW4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdhd3Q9CYW4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 Mir6349-201ENSMUST00000184059 97 ntBASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 Rab3c-203ENSMUST00000224180 967 ntBASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hdhd3Q9CYW4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hdhd3Q9CYW4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hdhd3Q9CYW4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hdhd3Q9CYW4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hdhd3Q9CYW4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Hdhd3Q9CYW4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hdhd3Q9CYW4 Gm10849-201ENSMUST00000100397 618 ntBASIC13.53□□□□□ -0.24
Hdhd3Q9CYW4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Hdhd3Q9CYW4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.53□□□□□ -0.24
Hdhd3Q9CYW4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.53□□□□□ -0.24
Hdhd3Q9CYW4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.53□□□□□ -0.24
Hdhd3Q9CYW4 Gm26571-201ENSMUST00000181399 666 ntBASIC13.53□□□□□ -0.24
Hdhd3Q9CYW4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hdhd3Q9CYW4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hdhd3Q9CYW4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Hdhd3Q9CYW4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.53□□□□□ -0.24
Hdhd3Q9CYW4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hdhd3Q9CYW4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Hdhd3Q9CYW4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hdhd3Q9CYW4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hdhd3Q9CYW4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Hdhd3Q9CYW4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Hdhd3Q9CYW4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hdhd3Q9CYW4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hdhd3Q9CYW4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hdhd3Q9CYW4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hdhd3Q9CYW4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Hdhd3Q9CYW4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hdhd3Q9CYW4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Hdhd3Q9CYW4 Gm15375-201ENSMUST00000119510 849 ntBASIC13.52□□□□□ -0.25
Hdhd3Q9CYW4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hdhd3Q9CYW4 Gm10138-203ENSMUST00000206952 366 ntBASIC13.52□□□□□ -0.25
Hdhd3Q9CYW4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Hdhd3Q9CYW4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hdhd3Q9CYW4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hdhd3Q9CYW4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hdhd3Q9CYW4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hdhd3Q9CYW4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hdhd3Q9CYW4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hdhd3Q9CYW4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Hdhd3Q9CYW4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hdhd3Q9CYW4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms