Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Chchd1Q9CQA6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chchd1Q9CQA6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chchd1Q9CQA6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chchd1Q9CQA6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Chchd1Q9CQA6 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms