Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb1Q9CQ70 Gm22240-201ENSMUST00000175225 82 ntBASIC13.58□□□□□ -0.24
H2afb1Q9CQ70 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.58□□□□□ -0.24
H2afb1Q9CQ70 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb1Q9CQ70 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb1Q9CQ70 Gm10812-201ENSMUST00000099864 546 ntBASIC13.58□□□□□ -0.24
H2afb1Q9CQ70 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
H2afb1Q9CQ70 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb1Q9CQ70 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb1Q9CQ70 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb1Q9CQ70 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb1Q9CQ70 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.58□□□□□ -0.24
H2afb1Q9CQ70 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
H2afb1Q9CQ70 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.58□□□□□ -0.24
H2afb1Q9CQ70 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb1Q9CQ70 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb1Q9CQ70 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.57□□□□□ -0.24
H2afb1Q9CQ70 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.57□□□□□ -0.24
H2afb1Q9CQ70 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb1Q9CQ70 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb1Q9CQ70 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb1Q9CQ70 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb1Q9CQ70 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb1Q9CQ70 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb1Q9CQ70 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.57□□□□□ -0.24
H2afb1Q9CQ70 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb1Q9CQ70 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb1Q9CQ70 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb1Q9CQ70 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb1Q9CQ70 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb1Q9CQ70 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb1Q9CQ70 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb1Q9CQ70 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.57□□□□□ -0.24
H2afb1Q9CQ70 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.57□□□□□ -0.24
H2afb1Q9CQ70 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb1Q9CQ70 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Mir5122-201ENSMUST00000175004 89 ntBASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
H2afb1Q9CQ70 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb1Q9CQ70 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms