Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh15Q99PJ1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh15Q99PJ1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh15Q99PJ1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh15Q99PJ1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh15Q99PJ1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh15Q99PJ1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh15Q99PJ1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh15Q99PJ1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Gm44335-201ENSMUST00000196879 141 ntBASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Gm44297-201ENSMUST00000198304 141 ntBASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Gm44346-201ENSMUST00000198851 141 ntBASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Gm44492-201ENSMUST00000197012 141 ntBASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh15Q99PJ1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.73■□□□□ 0.59
Pcdh15Q99PJ1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh15Q99PJ1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.73■□□□□ 0.59
Pcdh15Q99PJ1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Pcdh15Q99PJ1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh15Q99PJ1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh15Q99PJ1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh15Q99PJ1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdh15Q99PJ1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdh15Q99PJ1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh15Q99PJ1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh15Q99PJ1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh15Q99PJ1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 Gm4899-201ENSMUST00000178708 719 ntBASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 Gm45167-201ENSMUST00000208007 322 ntBASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh15Q99PJ1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh15Q99PJ1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh15Q99PJ1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh15Q99PJ1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh15Q99PJ1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh15Q99PJ1 AA543401-201ENSMUST00000164248 1269 ntBASIC18.71■□□□□ 0.59
Pcdh15Q99PJ1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh15Q99PJ1 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh15Q99PJ1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.71■□□□□ 0.59
Pcdh15Q99PJ1 Gm20949-201ENSMUST00000206478 952 ntBASIC18.71■□□□□ 0.59
Pcdh15Q99PJ1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Pcdh15Q99PJ1 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh15Q99PJ1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh15Q99PJ1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Pcdh15Q99PJ1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh15Q99PJ1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh15Q99PJ1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh15Q99PJ1 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms