Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Hps4Q99KG7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
Hps4Q99KG7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.45■□□□□ 0.7
Hps4Q99KG7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hps4Q99KG7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hps4Q99KG7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hps4Q99KG7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hps4Q99KG7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hps4Q99KG7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hps4Q99KG7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.45■□□□□ 0.7
Hps4Q99KG7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Hps4Q99KG7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.45■□□□□ 0.7
Hps4Q99KG7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hps4Q99KG7 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hps4Q99KG7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hps4Q99KG7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hps4Q99KG7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hps4Q99KG7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hps4Q99KG7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hps4Q99KG7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hps4Q99KG7 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hps4Q99KG7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.44■□□□□ 0.7
Hps4Q99KG7 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.44■□□□□ 0.7
Hps4Q99KG7 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.44■□□□□ 0.7
Hps4Q99KG7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.44■□□□□ 0.7
Hps4Q99KG7 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.44■□□□□ 0.7
Hps4Q99KG7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hps4Q99KG7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hps4Q99KG7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hps4Q99KG7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hps4Q99KG7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hps4Q99KG7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.44■□□□□ 0.7
Hps4Q99KG7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hps4Q99KG7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.43■□□□□ 0.7
Hps4Q99KG7 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.43■□□□□ 0.7
Hps4Q99KG7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hps4Q99KG7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hps4Q99KG7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hps4Q99KG7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.43■□□□□ 0.7
Hps4Q99KG7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hps4Q99KG7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hps4Q99KG7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.43■□□□□ 0.7
Hps4Q99KG7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hps4Q99KG7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hps4Q99KG7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.43■□□□□ 0.7
Hps4Q99KG7 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hps4Q99KG7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hps4Q99KG7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hps4Q99KG7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hps4Q99KG7 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hps4Q99KG7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
Hps4Q99KG7 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.42■□□□□ 0.7
Hps4Q99KG7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hps4Q99KG7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Hps4Q99KG7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hps4Q99KG7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Hps4Q99KG7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hps4Q99KG7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hps4Q99KG7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hps4Q99KG7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hps4Q99KG7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hps4Q99KG7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hps4Q99KG7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hps4Q99KG7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Hps4Q99KG7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hps4Q99KG7 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.41■□□□□ 0.7
Hps4Q99KG7 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.41■□□□□ 0.7
Hps4Q99KG7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hps4Q99KG7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.41■□□□□ 0.7
Hps4Q99KG7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Hps4Q99KG7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.41■□□□□ 0.7
Hps4Q99KG7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hps4Q99KG7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hps4Q99KG7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Hps4Q99KG7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hps4Q99KG7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hps4Q99KG7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Hps4Q99KG7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.4■□□□□ 0.7
Hps4Q99KG7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hps4Q99KG7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hps4Q99KG7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Hps4Q99KG7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hps4Q99KG7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Hps4Q99KG7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.4■□□□□ 0.7
Hps4Q99KG7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hps4Q99KG7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.4■□□□□ 0.7
Hps4Q99KG7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hps4Q99KG7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hps4Q99KG7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hps4Q99KG7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.4■□□□□ 0.7
Hps4Q99KG7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hps4Q99KG7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hps4Q99KG7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hps4Q99KG7 Gm6443-201ENSMUST00000203599 874 ntBASIC19.39■□□□□ 0.69
Hps4Q99KG7 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.39■□□□□ 0.69
Hps4Q99KG7 Rps4l-201ENSMUST00000071745 943 ntBASIC19.39■□□□□ 0.69
Hps4Q99KG7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.39■□□□□ 0.69
Hps4Q99KG7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hps4Q99KG7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hps4Q99KG7 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms