Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp11Q99K46 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp11Q99K46 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Usp11Q99K46 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp11Q99K46 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp11Q99K46 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp11Q99K46 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.5■□□□□ 0.39
Usp11Q99K46 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp11Q99K46 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp11Q99K46 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Usp11Q99K46 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp11Q99K46 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp11Q99K46 Gm7638-201ENSMUST00000121348 967 ntBASIC17.5■□□□□ 0.39
Usp11Q99K46 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp11Q99K46 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp11Q99K46 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp11Q99K46 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.5■□□□□ 0.39
Usp11Q99K46 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp11Q99K46 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp11Q99K46 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp11Q99K46 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Usp11Q99K46 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Usp11Q99K46 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Usp11Q99K46 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Usp11Q99K46 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp11Q99K46 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Usp11Q99K46 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Usp11Q99K46 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp11Q99K46 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.5■□□□□ 0.39
Usp11Q99K46 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp11Q99K46 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp11Q99K46 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.49■□□□□ 0.39
Usp11Q99K46 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Usp11Q99K46 Gm27463-201ENSMUST00000183569 57 ntBASIC17.49■□□□□ 0.39
Usp11Q99K46 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp11Q99K46 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp11Q99K46 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp11Q99K46 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp11Q99K46 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp11Q99K46 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp11Q99K46 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Usp11Q99K46 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp11Q99K46 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp11Q99K46 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp11Q99K46 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp11Q99K46 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.48■□□□□ 0.39
Usp11Q99K46 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp11Q99K46 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp11Q99K46 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.48■□□□□ 0.39
Usp11Q99K46 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp11Q99K46 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp11Q99K46 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Usp11Q99K46 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.48■□□□□ 0.39
Usp11Q99K46 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp11Q99K46 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.48■□□□□ 0.39
Usp11Q99K46 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp11Q99K46 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp11Q99K46 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp11Q99K46 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp11Q99K46 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp11Q99K46 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp11Q99K46 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Usp11Q99K46 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp11Q99K46 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Usp11Q99K46 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp11Q99K46 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp11Q99K46 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp11Q99K46 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp11Q99K46 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp11Q99K46 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp11Q99K46 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Usp11Q99K46 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Usp11Q99K46 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp11Q99K46 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp11Q99K46 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp11Q99K46 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp11Q99K46 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp11Q99K46 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp11Q99K46 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp11Q99K46 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.47■□□□□ 0.39
Usp11Q99K46 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Usp11Q99K46 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp11Q99K46 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp11Q99K46 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp11Q99K46 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp11Q99K46 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp11Q99K46 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Usp11Q99K46 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Usp11Q99K46 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp11Q99K46 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.46■□□□□ 0.39
Usp11Q99K46 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.46■□□□□ 0.39
Usp11Q99K46 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Usp11Q99K46 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp11Q99K46 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp11Q99K46 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp11Q99K46 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp11Q99K46 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp11Q99K46 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.46■□□□□ 0.39
Usp11Q99K46 Gm11539-201ENSMUST00000119837 557 ntBASIC17.46■□□□□ 0.39
Usp11Q99K46 Gm13436-201ENSMUST00000120418 567 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms