Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Chmp1aQ921W0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Gm15375-201ENSMUST00000119510 849 ntBASIC14.68□□□□□ -0.06
Chmp1aQ921W0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1aQ921W0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Gm5408-201ENSMUST00000197998 747 ntBASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Chmp1aQ921W0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp1aQ921W0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms