Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdha9Q91Y11 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdha9Q91Y11 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdha9Q91Y11 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.64■□□□□ 0.41
Pcdha9Q91Y11 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdha9Q91Y11 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Pcdha9Q91Y11 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdha9Q91Y11 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdha9Q91Y11 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.64■□□□□ 0.41
Pcdha9Q91Y11 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdha9Q91Y11 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.64■□□□□ 0.41
Pcdha9Q91Y11 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha9Q91Y11 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 AA414768-201ENSMUST00000121924 1257 ntBASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 Haglr-201ENSMUST00000100000 2085 ntBASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha9Q91Y11 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Mir770-201ENSMUST00000103252 94 ntBASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdha9Q91Y11 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha9Q91Y11 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha9Q91Y11 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha9Q91Y11 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdha9Q91Y11 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha9Q91Y11 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha9Q91Y11 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.6■□□□□ 0.41
Pcdha9Q91Y11 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.6■□□□□ 0.41
Pcdha9Q91Y11 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdha9Q91Y11 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdha9Q91Y11 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha9Q91Y11 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha9Q91Y11 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha9Q91Y11 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms