Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Gm6433-201ENSMUST00000118634 875 ntBASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb1Q91Y08 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Gm26039-201ENSMUST00000158152 144 ntBASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb1Q91Y08 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Gm11336-201ENSMUST00000118168 334 ntBASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms