Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Pcdhb3Q91XZ7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdhb3Q91XZ7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.6■□□□□ 0.25
Pcdhb3Q91XZ7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb3Q91XZ7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb3Q91XZ7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhb3Q91XZ7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb3Q91XZ7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb3Q91XZ7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb3Q91XZ7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb3Q91XZ7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb3Q91XZ7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb3Q91XZ7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb3Q91XZ7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
Pcdhb3Q91XZ7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Pcdhb3Q91XZ7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhb3Q91XZ7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb3Q91XZ7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdhb3Q91XZ7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhb3Q91XZ7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb3Q91XZ7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb3Q91XZ7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb3Q91XZ7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb3Q91XZ7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb3Q91XZ7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb3Q91XZ7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb3Q91XZ7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb3Q91XZ7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.58■□□□□ 0.24
Pcdhb3Q91XZ7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb3Q91XZ7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb3Q91XZ7 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb3Q91XZ7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb3Q91XZ7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb3Q91XZ7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Zfp783-201ENSMUST00000095946 670 ntBASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms