Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Gm10812-201ENSMUST00000099864 546 ntBASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb4Q91XZ6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Gm27000-201ENSMUST00000182943 842 ntBASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb4Q91XZ6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb4Q91XZ6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb4Q91XZ6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb4Q91XZ6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Odf3b-204ENSMUST00000227834 930 ntBASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb4Q91XZ6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb4Q91XZ6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb4Q91XZ6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb4Q91XZ6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Pcdhb4Q91XZ6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb4Q91XZ6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb4Q91XZ6 Gm7791-201ENSMUST00000219066 539 ntBASIC16.44■□□□□ 0.22
Pcdhb4Q91XZ6 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.44■□□□□ 0.22
Pcdhb4Q91XZ6 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.44■□□□□ 0.22
Pcdhb4Q91XZ6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms