Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb6Q91XZ4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb6Q91XZ4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Gm29707-201ENSMUST00000196325 491 ntBASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhb6Q91XZ4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Gm18032-201ENSMUST00000222541 538 ntBASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhb6Q91XZ4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhb6Q91XZ4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb6Q91XZ4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb6Q91XZ4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhb6Q91XZ4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb6Q91XZ4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb6Q91XZ4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb6Q91XZ4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb6Q91XZ4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb6Q91XZ4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Pcdhb6Q91XZ4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb6Q91XZ4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhb6Q91XZ4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb6Q91XZ4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb6Q91XZ4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb6Q91XZ4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb6Q91XZ4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb6Q91XZ4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb6Q91XZ4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb6Q91XZ4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb6Q91XZ4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb6Q91XZ4 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.01■□□□□ 0.31
Pcdhb6Q91XZ4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb6Q91XZ4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb6Q91XZ4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb6Q91XZ4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb6Q91XZ4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb6Q91XZ4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb6Q91XZ4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms