Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Gm7370-201ENSMUST00000219471 767 ntBASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga4Q91XY4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhga4Q91XY4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhga4Q91XY4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhga4Q91XY4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Dancr-204ENSMUST00000132389 2347 ntBASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga4Q91XY4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhga4Q91XY4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Gm25016-201ENSMUST00000158399 131 ntBASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Gm7213-201ENSMUST00000215977 950 ntBASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhga4Q91XY4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms