Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 Gm10566-201ENSMUST00000086739 996 ntBASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga9Q91XX9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga9Q91XX9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga9Q91XX9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms