Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhgc3Q91XX1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhgc3Q91XX1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhgc3Q91XX1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhgc3Q91XX1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhgc3Q91XX1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhgc3Q91XX1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhgc3Q91XX1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhgc3Q91XX1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhgc3Q91XX1 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.72■□□□□ 0.11
Pcdhgc3Q91XX1 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.72■□□□□ 0.11
Pcdhgc3Q91XX1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdhgc3Q91XX1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhgc3Q91XX1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.71■□□□□ 0.11
Pcdhgc3Q91XX1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhgc3Q91XX1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhgc3Q91XX1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhgc3Q91XX1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhgc3Q91XX1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhgc3Q91XX1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhgc3Q91XX1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhgc3Q91XX1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhgc3Q91XX1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.71■□□□□ 0.11
Pcdhgc3Q91XX1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhgc3Q91XX1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Pcdhgc3Q91XX1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhgc3Q91XX1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhgc3Q91XX1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhgc3Q91XX1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhgc3Q91XX1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhgc3Q91XX1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhgc3Q91XX1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhgc3Q91XX1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgc3Q91XX1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgc3Q91XX1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgc3Q91XX1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhgc3Q91XX1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgc3Q91XX1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgc3Q91XX1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.68■□□□□ 0.1
Pcdhgc3Q91XX1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgc3Q91XX1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Pcdhgc3Q91XX1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhgc3Q91XX1 Rab3c-203ENSMUST00000224180 967 ntBASIC15.68■□□□□ 0.1
Pcdhgc3Q91XX1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdhgc3Q91XX1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms