Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trex1Q91XB0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trex1Q91XB0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trex1Q91XB0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Trex1Q91XB0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trex1Q91XB0 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.97■□□□□ 0.63
Trex1Q91XB0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trex1Q91XB0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trex1Q91XB0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.97■□□□□ 0.63
Trex1Q91XB0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trex1Q91XB0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trex1Q91XB0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trex1Q91XB0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trex1Q91XB0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trex1Q91XB0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trex1Q91XB0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trex1Q91XB0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trex1Q91XB0 Gm7862-201ENSMUST00000121461 292 ntBASIC18.96■□□□□ 0.63
Trex1Q91XB0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.96■□□□□ 0.63
Trex1Q91XB0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trex1Q91XB0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trex1Q91XB0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trex1Q91XB0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trex1Q91XB0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.96■□□□□ 0.63
Trex1Q91XB0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trex1Q91XB0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trex1Q91XB0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trex1Q91XB0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trex1Q91XB0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trex1Q91XB0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trex1Q91XB0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trex1Q91XB0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trex1Q91XB0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trex1Q91XB0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trex1Q91XB0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trex1Q91XB0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trex1Q91XB0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trex1Q91XB0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trex1Q91XB0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trex1Q91XB0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trex1Q91XB0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.95■□□□□ 0.62
Trex1Q91XB0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Trex1Q91XB0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trex1Q91XB0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trex1Q91XB0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trex1Q91XB0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trex1Q91XB0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trex1Q91XB0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trex1Q91XB0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
Trex1Q91XB0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trex1Q91XB0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trex1Q91XB0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trex1Q91XB0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trex1Q91XB0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trex1Q91XB0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trex1Q91XB0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trex1Q91XB0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trex1Q91XB0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trex1Q91XB0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.94■□□□□ 0.62
Trex1Q91XB0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.94■□□□□ 0.62
Trex1Q91XB0 Gm2651-201ENSMUST00000203560 838 ntBASIC18.94■□□□□ 0.62
Trex1Q91XB0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trex1Q91XB0 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.94■□□□□ 0.62
Trex1Q91XB0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trex1Q91XB0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trex1Q91XB0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trex1Q91XB0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Gm25745-201ENSMUST00000174945 133 ntBASIC18.93■□□□□ 0.62
Trex1Q91XB0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trex1Q91XB0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trex1Q91XB0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Trex1Q91XB0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trex1Q91XB0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trex1Q91XB0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms