Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Gm4535-201ENSMUST00000182274 558 ntBASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Gm10355-201ENSMUST00000097146 517 ntBASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Gm15653-201ENSMUST00000119247 907 ntBASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Gm8396-201ENSMUST00000057361 823 ntBASIC14.23□□□□□ -0.13
Cspg4Q8VHY0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 Gm12497-201ENSMUST00000138778 237 ntBASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg4Q8VHY0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Gm25990-201ENSMUST00000102440 86 ntBASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Gm7506-201ENSMUST00000207758 815 ntBASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg4Q8VHY0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cspg4Q8VHY0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cspg4Q8VHY0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cspg4Q8VHY0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cspg4Q8VHY0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg4Q8VHY0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg4Q8VHY0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cspg4Q8VHY0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg4Q8VHY0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg4Q8VHY0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.2□□□□□ -0.14
Cspg4Q8VHY0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg4Q8VHY0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg4Q8VHY0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg4Q8VHY0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.2□□□□□ -0.14
Cspg4Q8VHY0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg4Q8VHY0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg4Q8VHY0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg4Q8VHY0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms