Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh18Q8VHR0 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh18Q8VHR0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh18Q8VHR0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.02■□□□□ 0.16
Pcdh18Q8VHR0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh18Q8VHR0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh18Q8VHR0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh18Q8VHR0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh18Q8VHR0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh18Q8VHR0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Pcdh18Q8VHR0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh18Q8VHR0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh18Q8VHR0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Gm13158-201ENSMUST00000122007 736 ntBASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh18Q8VHR0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh18Q8VHR0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdh18Q8VHR0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh18Q8VHR0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
Pcdh18Q8VHR0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh18Q8VHR0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.99■□□□□ 0.15
Pcdh18Q8VHR0 Gm12441-201ENSMUST00000121806 588 ntBASIC15.99■□□□□ 0.15
Pcdh18Q8VHR0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh18Q8VHR0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh18Q8VHR0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh18Q8VHR0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh18Q8VHR0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh18Q8VHR0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh18Q8VHR0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh18Q8VHR0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh18Q8VHR0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh18Q8VHR0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms