Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ndc1Q8VCB1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ndc1Q8VCB1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ndc1Q8VCB1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ndc1Q8VCB1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Ndc1Q8VCB1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Gm27741-201ENSMUST00000185060 237 ntBASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Ndc1Q8VCB1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ndc1Q8VCB1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 Gm11336-201ENSMUST00000118168 334 ntBASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms