Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chrna3Q8R4G9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 Gm7284-201ENSMUST00000131667 944 ntBASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 Gm27704-201ENSMUST00000185094 107 ntBASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 Gm44450-201ENSMUST00000199528 114 ntBASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.29■□□□□ 0.2
Chrna3Q8R4G9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chrna3Q8R4G9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.28■□□□□ 0.2
Chrna3Q8R4G9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chrna3Q8R4G9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Chrna3Q8R4G9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chrna3Q8R4G9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chrna3Q8R4G9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chrna3Q8R4G9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.28■□□□□ 0.2
Chrna3Q8R4G9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.28■□□□□ 0.2
Chrna3Q8R4G9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chrna3Q8R4G9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chrna3Q8R4G9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chrna3Q8R4G9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chrna3Q8R4G9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chrna3Q8R4G9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chrna3Q8R4G9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chrna3Q8R4G9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chrna3Q8R4G9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.28■□□□□ 0.2
Chrna3Q8R4G9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chrna3Q8R4G9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chrna3Q8R4G9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chrna3Q8R4G9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chrna3Q8R4G9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chrna3Q8R4G9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chrna3Q8R4G9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.27■□□□□ 0.2
Chrna3Q8R4G9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chrna3Q8R4G9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.27■□□□□ 0.2
Chrna3Q8R4G9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chrna3Q8R4G9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chrna3Q8R4G9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Chrna3Q8R4G9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chrna3Q8R4G9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chrna3Q8R4G9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chrna3Q8R4G9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chrna3Q8R4G9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chrna3Q8R4G9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Chrna3Q8R4G9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.27■□□□□ 0.19
Chrna3Q8R4G9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chrna3Q8R4G9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Chrna3Q8R4G9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chrna3Q8R4G9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chrna3Q8R4G9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chrna3Q8R4G9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.26■□□□□ 0.19
Chrna3Q8R4G9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chrna3Q8R4G9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.26■□□□□ 0.19
Chrna3Q8R4G9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chrna3Q8R4G9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Chrna3Q8R4G9 Gm29707-201ENSMUST00000196325 491 ntBASIC16.26■□□□□ 0.19
Chrna3Q8R4G9 Gm18421-201ENSMUST00000204122 625 ntBASIC16.26■□□□□ 0.19
Chrna3Q8R4G9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chrna3Q8R4G9 Gm45328-201ENSMUST00000210942 917 ntBASIC16.26■□□□□ 0.19
Chrna3Q8R4G9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Chrna3Q8R4G9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chrna3Q8R4G9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chrna3Q8R4G9 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.26■□□□□ 0.19
Chrna3Q8R4G9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chrna3Q8R4G9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chrna3Q8R4G9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms