Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cd109Q8R422 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Cd109Q8R422 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cd109Q8R422 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC23.46■■□□□ 1.35
Cd109Q8R422 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC23.46■■□□□ 1.35
Cd109Q8R422 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC23.46■■□□□ 1.35
Cd109Q8R422 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC23.46■■□□□ 1.35
Cd109Q8R422 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Cd109Q8R422 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC23.46■■□□□ 1.35
Cd109Q8R422 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cd109Q8R422 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cd109Q8R422 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC23.46■■□□□ 1.35
Cd109Q8R422 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cd109Q8R422 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cd109Q8R422 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
Cd109Q8R422 Gm44832-201ENSMUST00000208849 2303 ntBASIC23.45■■□□□ 1.35
Cd109Q8R422 Gm25406-201ENSMUST00000157599 105 ntBASIC23.45■■□□□ 1.34
Cd109Q8R422 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cd109Q8R422 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Cd109Q8R422 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC23.45■■□□□ 1.34
Cd109Q8R422 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cd109Q8R422 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Cd109Q8R422 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Cd109Q8R422 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cd109Q8R422 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC23.45■■□□□ 1.34
Cd109Q8R422 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cd109Q8R422 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cd109Q8R422 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cd109Q8R422 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cd109Q8R422 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Cd109Q8R422 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC23.44■■□□□ 1.34
Cd109Q8R422 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cd109Q8R422 Gm37584-201ENSMUST00000193595 1290 ntBASIC23.44■■□□□ 1.34
Cd109Q8R422 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Cd109Q8R422 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cd109Q8R422 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC23.43■■□□□ 1.34
Cd109Q8R422 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Cd109Q8R422 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cd109Q8R422 Gm37811-201ENSMUST00000192416 2601 ntBASIC23.43■■□□□ 1.34
Cd109Q8R422 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cd109Q8R422 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cd109Q8R422 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC23.43■■□□□ 1.34
Cd109Q8R422 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cd109Q8R422 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cd109Q8R422 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cd109Q8R422 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Cd109Q8R422 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cd109Q8R422 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC23.42■■□□□ 1.34
Cd109Q8R422 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC23.42■■□□□ 1.34
Cd109Q8R422 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cd109Q8R422 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cd109Q8R422 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cd109Q8R422 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cd109Q8R422 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC23.42■■□□□ 1.34
Cd109Q8R422 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cd109Q8R422 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cd109Q8R422 Gm6858-201ENSMUST00000208582 1468 ntBASIC23.42■■□□□ 1.34
Cd109Q8R422 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cd109Q8R422 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cd109Q8R422 Gm15173-201ENSMUST00000122049 433 ntBASIC23.42■■□□□ 1.34
Cd109Q8R422 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Cd109Q8R422 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC23.42■■□□□ 1.34
Cd109Q8R422 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC23.42■■□□□ 1.34
Cd109Q8R422 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC23.42■■□□□ 1.34
Cd109Q8R422 Gm5867-201ENSMUST00000063197 592 ntBASIC23.42■■□□□ 1.34
Cd109Q8R422 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cd109Q8R422 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cd109Q8R422 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cd109Q8R422 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC23.41■■□□□ 1.34
Cd109Q8R422 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Cd109Q8R422 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Cd109Q8R422 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Cd109Q8R422 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cd109Q8R422 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cd109Q8R422 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cd109Q8R422 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cd109Q8R422 Gm11780-201ENSMUST00000136880 516 ntBASIC23.41■■□□□ 1.34
Cd109Q8R422 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Cd109Q8R422 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Cd109Q8R422 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cd109Q8R422 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Cd109Q8R422 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cd109Q8R422 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cd109Q8R422 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cd109Q8R422 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cd109Q8R422 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC23.4■■□□□ 1.34
Cd109Q8R422 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cd109Q8R422 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC23.4■■□□□ 1.34
Cd109Q8R422 AC132104.2-201ENSMUST00000215011 266 ntBASIC23.4■■□□□ 1.34
Cd109Q8R422 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cd109Q8R422 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cd109Q8R422 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Cd109Q8R422 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
Cd109Q8R422 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Cd109Q8R422 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC23.39■■□□□ 1.33
Cd109Q8R422 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC23.39■■□□□ 1.33
Cd109Q8R422 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC23.39■■□□□ 1.33
Cd109Q8R422 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Cd109Q8R422 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Cd109Q8R422 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms