Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf3c5Q8R2T8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf3c5Q8R2T8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf3c5Q8R2T8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf3c5Q8R2T8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf3c5Q8R2T8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Gtf3c5Q8R2T8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf3c5Q8R2T8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 AC164107.1-201ENSMUST00000227730 2161 ntBASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Gm9013-201ENSMUST00000132939 882 ntBASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c5Q8R2T8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 Gm11355-201ENSMUST00000121120 306 ntBASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 Gm25016-201ENSMUST00000158399 131 ntBASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 Gm37437-201ENSMUST00000194451 1937 ntBASIC19.43■□□□□ 0.7
Gtf3c5Q8R2T8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c5Q8R2T8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c5Q8R2T8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf3c5Q8R2T8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf3c5Q8R2T8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms