Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim29Q8R2Q0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim29Q8R2Q0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim29Q8R2Q0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.95■□□□□ 0.62
Trim29Q8R2Q0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim29Q8R2Q0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.95■□□□□ 0.62
Trim29Q8R2Q0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.95■□□□□ 0.62
Trim29Q8R2Q0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim29Q8R2Q0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim29Q8R2Q0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim29Q8R2Q0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim29Q8R2Q0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim29Q8R2Q0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim29Q8R2Q0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim29Q8R2Q0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim29Q8R2Q0 Haglr-201ENSMUST00000100000 2085 ntBASIC18.94■□□□□ 0.62
Trim29Q8R2Q0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim29Q8R2Q0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim29Q8R2Q0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.94■□□□□ 0.62
Trim29Q8R2Q0 Mir5130-201ENSMUST00000175160 84 ntBASIC18.94■□□□□ 0.62
Trim29Q8R2Q0 Gm43799-201ENSMUST00000201845 579 ntBASIC18.94■□□□□ 0.62
Trim29Q8R2Q0 Gm18959-201ENSMUST00000208954 655 ntBASIC18.94■□□□□ 0.62
Trim29Q8R2Q0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim29Q8R2Q0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim29Q8R2Q0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trim29Q8R2Q0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim29Q8R2Q0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.94■□□□□ 0.62
Trim29Q8R2Q0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim29Q8R2Q0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim29Q8R2Q0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim29Q8R2Q0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim29Q8R2Q0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim29Q8R2Q0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim29Q8R2Q0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim29Q8R2Q0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim29Q8R2Q0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim29Q8R2Q0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trim29Q8R2Q0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.93■□□□□ 0.62
Trim29Q8R2Q0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim29Q8R2Q0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim29Q8R2Q0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim29Q8R2Q0 Gm7889-201ENSMUST00000185591 958 ntBASIC18.93■□□□□ 0.62
Trim29Q8R2Q0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trim29Q8R2Q0 Gm7213-201ENSMUST00000215977 950 ntBASIC18.93■□□□□ 0.62
Trim29Q8R2Q0 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.93■□□□□ 0.62
Trim29Q8R2Q0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trim29Q8R2Q0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim29Q8R2Q0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim29Q8R2Q0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim29Q8R2Q0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim29Q8R2Q0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim29Q8R2Q0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim29Q8R2Q0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim29Q8R2Q0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Trim29Q8R2Q0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim29Q8R2Q0 Gm13186-201ENSMUST00000118031 316 ntBASIC18.92■□□□□ 0.62
Trim29Q8R2Q0 Gm15565-201ENSMUST00000118890 427 ntBASIC18.92■□□□□ 0.62
Trim29Q8R2Q0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.92■□□□□ 0.62
Trim29Q8R2Q0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.92■□□□□ 0.62
Trim29Q8R2Q0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim29Q8R2Q0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim29Q8R2Q0 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.92■□□□□ 0.62
Trim29Q8R2Q0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim29Q8R2Q0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim29Q8R2Q0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim29Q8R2Q0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
Trim29Q8R2Q0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim29Q8R2Q0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim29Q8R2Q0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim29Q8R2Q0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim29Q8R2Q0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim29Q8R2Q0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim29Q8R2Q0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim29Q8R2Q0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim29Q8R2Q0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim29Q8R2Q0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.91■□□□□ 0.62
Trim29Q8R2Q0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trim29Q8R2Q0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trim29Q8R2Q0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trim29Q8R2Q0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim29Q8R2Q0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim29Q8R2Q0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trim29Q8R2Q0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.9■□□□□ 0.62
Trim29Q8R2Q0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim29Q8R2Q0 Gm45058-201ENSMUST00000205810 766 ntBASIC18.9■□□□□ 0.62
Trim29Q8R2Q0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim29Q8R2Q0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim29Q8R2Q0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim29Q8R2Q0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim29Q8R2Q0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim29Q8R2Q0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim29Q8R2Q0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim29Q8R2Q0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim29Q8R2Q0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim29Q8R2Q0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim29Q8R2Q0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Trim29Q8R2Q0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim29Q8R2Q0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim29Q8R2Q0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim29Q8R2Q0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms