Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Zcchc9Q8R1J3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Zcchc9Q8R1J3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Zcchc9Q8R1J3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Zcchc9Q8R1J3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Zcchc9Q8R1J3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Zcchc9Q8R1J3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Zcchc9Q8R1J3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Zcchc9Q8R1J3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Zcchc9Q8R1J3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Zcchc9Q8R1J3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Zcchc9Q8R1J3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Zcchc9Q8R1J3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Zcchc9Q8R1J3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Zcchc9Q8R1J3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Zcchc9Q8R1J3 Gm15794-201ENSMUST00000120182 631 ntBASIC16.52■□□□□ 0.24
Zcchc9Q8R1J3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Zcchc9Q8R1J3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.52■□□□□ 0.24
Zcchc9Q8R1J3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Zcchc9Q8R1J3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Zcchc9Q8R1J3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Zcchc9Q8R1J3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Zcchc9Q8R1J3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Zcchc9Q8R1J3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Zcchc9Q8R1J3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Zcchc9Q8R1J3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Zcchc9Q8R1J3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.52■□□□□ 0.23
Zcchc9Q8R1J3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Zcchc9Q8R1J3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Zcchc9Q8R1J3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.52■□□□□ 0.23
Zcchc9Q8R1J3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Zcchc9Q8R1J3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Dancr-204ENSMUST00000132389 2347 ntBASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Zcchc9Q8R1J3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Gm28659-201ENSMUST00000188013 759 ntBASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zcchc9Q8R1J3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms