Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
Tm6sf2Q8R1J1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Tm6sf2Q8R1J1 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.58■□□□□ 0.09
Tm6sf2Q8R1J1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tm6sf2Q8R1J1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tm6sf2Q8R1J1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tm6sf2Q8R1J1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tm6sf2Q8R1J1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tm6sf2Q8R1J1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.58■□□□□ 0.08
Tm6sf2Q8R1J1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.58■□□□□ 0.08
Tm6sf2Q8R1J1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Tm6sf2Q8R1J1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tm6sf2Q8R1J1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tm6sf2Q8R1J1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tm6sf2Q8R1J1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Tm6sf2Q8R1J1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tm6sf2Q8R1J1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.58■□□□□ 0.08
Tm6sf2Q8R1J1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tm6sf2Q8R1J1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tm6sf2Q8R1J1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tm6sf2Q8R1J1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tm6sf2Q8R1J1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tm6sf2Q8R1J1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Gm27704-201ENSMUST00000185094 107 ntBASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Gm29707-201ENSMUST00000196325 491 ntBASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.57■□□□□ 0.08
Tm6sf2Q8R1J1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Tm6sf2Q8R1J1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms