Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sf3a1Q8K4Z5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sf3a1Q8K4Z5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sf3a1Q8K4Z5 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sf3a1Q8K4Z5 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.3■□□□□ 0.84
Sf3a1Q8K4Z5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sf3a1Q8K4Z5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sf3a1Q8K4Z5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sf3a1Q8K4Z5 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Sf3a1Q8K4Z5 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sf3a1Q8K4Z5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sf3a1Q8K4Z5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3a1Q8K4Z5 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3a1Q8K4Z5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3a1Q8K4Z5 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.28■□□□□ 0.84
Sf3a1Q8K4Z5 Gm9013-201ENSMUST00000132939 882 ntBASIC20.28■□□□□ 0.84
Sf3a1Q8K4Z5 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3a1Q8K4Z5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Sf3a1Q8K4Z5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3a1Q8K4Z5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3a1Q8K4Z5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3a1Q8K4Z5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3a1Q8K4Z5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3a1Q8K4Z5 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3a1Q8K4Z5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3a1Q8K4Z5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3a1Q8K4Z5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3a1Q8K4Z5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3a1Q8K4Z5 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Sf3a1Q8K4Z5 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3a1Q8K4Z5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3a1Q8K4Z5 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3a1Q8K4Z5 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.27■□□□□ 0.84
Sf3a1Q8K4Z5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3a1Q8K4Z5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3a1Q8K4Z5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3a1Q8K4Z5 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.27■□□□□ 0.84
Sf3a1Q8K4Z5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Sf3a1Q8K4Z5 Gm5587-201ENSMUST00000206270 674 ntBASIC20.27■□□□□ 0.84
Sf3a1Q8K4Z5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3a1Q8K4Z5 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3a1Q8K4Z5 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3a1Q8K4Z5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3a1Q8K4Z5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sf3a1Q8K4Z5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sf3a1Q8K4Z5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sf3a1Q8K4Z5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3a1Q8K4Z5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3a1Q8K4Z5 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3a1Q8K4Z5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3a1Q8K4Z5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3a1Q8K4Z5 AA414768-201ENSMUST00000121924 1257 ntBASIC20.26■□□□□ 0.83
Sf3a1Q8K4Z5 Gm18421-201ENSMUST00000204122 625 ntBASIC20.26■□□□□ 0.83
Sf3a1Q8K4Z5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3a1Q8K4Z5 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.26■□□□□ 0.83
Sf3a1Q8K4Z5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3a1Q8K4Z5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3a1Q8K4Z5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3a1Q8K4Z5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3a1Q8K4Z5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3a1Q8K4Z5 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.26■□□□□ 0.83
Sf3a1Q8K4Z5 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3a1Q8K4Z5 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.26■□□□□ 0.83
Sf3a1Q8K4Z5 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3a1Q8K4Z5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sf3a1Q8K4Z5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.25■□□□□ 0.83
Sf3a1Q8K4Z5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sf3a1Q8K4Z5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sf3a1Q8K4Z5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.25■□□□□ 0.83
Sf3a1Q8K4Z5 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sf3a1Q8K4Z5 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Sf3a1Q8K4Z5 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.25■□□□□ 0.83
Sf3a1Q8K4Z5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sf3a1Q8K4Z5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Sf3a1Q8K4Z5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.25■□□□□ 0.83
Sf3a1Q8K4Z5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms