Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cchcr1Q8K2I2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cchcr1Q8K2I2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cchcr1Q8K2I2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cchcr1Q8K2I2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cchcr1Q8K2I2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cchcr1Q8K2I2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cchcr1Q8K2I2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cchcr1Q8K2I2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cchcr1Q8K2I2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cchcr1Q8K2I2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cchcr1Q8K2I2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cchcr1Q8K2I2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cchcr1Q8K2I2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cchcr1Q8K2I2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cchcr1Q8K2I2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cchcr1Q8K2I2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cchcr1Q8K2I2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cchcr1Q8K2I2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cchcr1Q8K2I2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cchcr1Q8K2I2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cchcr1Q8K2I2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Gm13186-201ENSMUST00000118031 316 ntBASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.59■□□□□ 0.73
Cchcr1Q8K2I2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cchcr1Q8K2I2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cchcr1Q8K2I2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cchcr1Q8K2I2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cchcr1Q8K2I2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cchcr1Q8K2I2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cchcr1Q8K2I2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
Cchcr1Q8K2I2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cchcr1Q8K2I2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cchcr1Q8K2I2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.58■□□□□ 0.72
Cchcr1Q8K2I2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cchcr1Q8K2I2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.58■□□□□ 0.72
Cchcr1Q8K2I2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cchcr1Q8K2I2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Cchcr1Q8K2I2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cchcr1Q8K2I2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cchcr1Q8K2I2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cchcr1Q8K2I2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cchcr1Q8K2I2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.58■□□□□ 0.72
Cchcr1Q8K2I2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cchcr1Q8K2I2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cchcr1Q8K2I2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cchcr1Q8K2I2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cchcr1Q8K2I2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cchcr1Q8K2I2 Actl10-202ENSMUST00000226583 1501 ntBASIC19.57■□□□□ 0.72
Cchcr1Q8K2I2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cchcr1Q8K2I2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cchcr1Q8K2I2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.57■□□□□ 0.72
Cchcr1Q8K2I2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cchcr1Q8K2I2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms