Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim68Q8K243 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim68Q8K243 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim68Q8K243 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Trim68Q8K243 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim68Q8K243 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Trim68Q8K243 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim68Q8K243 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim68Q8K243 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim68Q8K243 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim68Q8K243 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim68Q8K243 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim68Q8K243 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim68Q8K243 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim68Q8K243 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.96■□□□□ 0.47
Trim68Q8K243 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim68Q8K243 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim68Q8K243 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Trim68Q8K243 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim68Q8K243 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.96■□□□□ 0.47
Trim68Q8K243 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trim68Q8K243 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trim68Q8K243 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim68Q8K243 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.96■□□□□ 0.47
Trim68Q8K243 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim68Q8K243 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim68Q8K243 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim68Q8K243 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim68Q8K243 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.96■□□□□ 0.47
Trim68Q8K243 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim68Q8K243 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim68Q8K243 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim68Q8K243 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Trim68Q8K243 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trim68Q8K243 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim68Q8K243 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim68Q8K243 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim68Q8K243 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Trim68Q8K243 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim68Q8K243 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim68Q8K243 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim68Q8K243 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim68Q8K243 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim68Q8K243 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim68Q8K243 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim68Q8K243 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim68Q8K243 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim68Q8K243 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.95■□□□□ 0.46
Trim68Q8K243 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim68Q8K243 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trim68Q8K243 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
Trim68Q8K243 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
Trim68Q8K243 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.95■□□□□ 0.46
Trim68Q8K243 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim68Q8K243 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim68Q8K243 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim68Q8K243 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim68Q8K243 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Trim68Q8K243 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim68Q8K243 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim68Q8K243 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim68Q8K243 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim68Q8K243 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim68Q8K243 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim68Q8K243 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim68Q8K243 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim68Q8K243 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim68Q8K243 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim68Q8K243 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim68Q8K243 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim68Q8K243 Gm12895-201ENSMUST00000122214 226 ntBASIC17.94■□□□□ 0.46
Trim68Q8K243 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim68Q8K243 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trim68Q8K243 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.94■□□□□ 0.46
Trim68Q8K243 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim68Q8K243 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim68Q8K243 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim68Q8K243 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim68Q8K243 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim68Q8K243 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim68Q8K243 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Trim68Q8K243 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim68Q8K243 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.93■□□□□ 0.46
Trim68Q8K243 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim68Q8K243 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.93■□□□□ 0.46
Trim68Q8K243 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim68Q8K243 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim68Q8K243 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim68Q8K243 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim68Q8K243 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Trim68Q8K243 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim68Q8K243 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.93■□□□□ 0.46
Trim68Q8K243 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim68Q8K243 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim68Q8K243 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim68Q8K243 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim68Q8K243 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim68Q8K243 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim68Q8K243 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim68Q8K243 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms