Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Depdc1aQ8CIG0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Gm27459-201ENSMUST00000184860 107 ntBASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1aQ8CIG0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.63■□□□□ 0.57
Depdc1aQ8CIG0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Depdc1aQ8CIG0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.62■□□□□ 0.57
Depdc1aQ8CIG0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.62■□□□□ 0.57
Depdc1aQ8CIG0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.62■□□□□ 0.57
Depdc1aQ8CIG0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Depdc1aQ8CIG0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Depdc1aQ8CIG0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.62■□□□□ 0.57
Depdc1aQ8CIG0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Depdc1aQ8CIG0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Depdc1aQ8CIG0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Depdc1aQ8CIG0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Depdc1aQ8CIG0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Depdc1aQ8CIG0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Depdc1aQ8CIG0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Gm44454-201ENSMUST00000198541 138 ntBASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Gm7461-201ENSMUST00000058918 827 ntBASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms