Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rftn2Q8CHX7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rftn2Q8CHX7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rftn2Q8CHX7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Rftn2Q8CHX7 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.6■□□□□ 0.41
Rftn2Q8CHX7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rftn2Q8CHX7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rftn2Q8CHX7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.6■□□□□ 0.41
Rftn2Q8CHX7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rftn2Q8CHX7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rftn2Q8CHX7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rftn2Q8CHX7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Rftn2Q8CHX7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rftn2Q8CHX7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rftn2Q8CHX7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.6■□□□□ 0.41
Rftn2Q8CHX7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rftn2Q8CHX7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rftn2Q8CHX7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rftn2Q8CHX7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rftn2Q8CHX7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rftn2Q8CHX7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rftn2Q8CHX7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rftn2Q8CHX7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rftn2Q8CHX7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rftn2Q8CHX7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rftn2Q8CHX7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rftn2Q8CHX7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rftn2Q8CHX7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rftn2Q8CHX7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.59■□□□□ 0.41
Rftn2Q8CHX7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.59■□□□□ 0.41
Rftn2Q8CHX7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rftn2Q8CHX7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.59■□□□□ 0.41
Rftn2Q8CHX7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rftn2Q8CHX7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
Rftn2Q8CHX7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rftn2Q8CHX7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rftn2Q8CHX7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rftn2Q8CHX7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rftn2Q8CHX7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rftn2Q8CHX7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rftn2Q8CHX7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rftn2Q8CHX7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rftn2Q8CHX7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rftn2Q8CHX7 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.58■□□□□ 0.41
Rftn2Q8CHX7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rftn2Q8CHX7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rftn2Q8CHX7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rftn2Q8CHX7 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.58■□□□□ 0.4
Rftn2Q8CHX7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rftn2Q8CHX7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rftn2Q8CHX7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rftn2Q8CHX7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rftn2Q8CHX7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rftn2Q8CHX7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rftn2Q8CHX7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rftn2Q8CHX7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rftn2Q8CHX7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.58■□□□□ 0.4
Rftn2Q8CHX7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rftn2Q8CHX7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rftn2Q8CHX7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rftn2Q8CHX7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rftn2Q8CHX7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rftn2Q8CHX7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rftn2Q8CHX7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rftn2Q8CHX7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Birc2-201ENSMUST00000054878 378 ntBASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rftn2Q8CHX7 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rftn2Q8CHX7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.56■□□□□ 0.4
Rftn2Q8CHX7 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rftn2Q8CHX7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rftn2Q8CHX7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rftn2Q8CHX7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rftn2Q8CHX7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rftn2Q8CHX7 Gm24589-201ENSMUST00000116692 94 ntBASIC17.56■□□□□ 0.4
Rftn2Q8CHX7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms