Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rdh1Q8CGV4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh1Q8CGV4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh1Q8CGV4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rdh1Q8CGV4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Rdh1Q8CGV4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
Rdh1Q8CGV4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh1Q8CGV4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.08■□□□□ 0.16
Rdh1Q8CGV4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh1Q8CGV4 Gm44430-201ENSMUST00000203376 995 ntBASIC16.08■□□□□ 0.16
Rdh1Q8CGV4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.08■□□□□ 0.16
Rdh1Q8CGV4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh1Q8CGV4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Rdh1Q8CGV4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh1Q8CGV4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh1Q8CGV4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh1Q8CGV4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh1Q8CGV4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh1Q8CGV4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.08■□□□□ 0.16
Rdh1Q8CGV4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh1Q8CGV4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh1Q8CGV4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.08■□□□□ 0.16
Rdh1Q8CGV4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Gm24589-201ENSMUST00000116692 94 ntBASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Gm12895-201ENSMUST00000122214 226 ntBASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh1Q8CGV4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh1Q8CGV4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms